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  5. Solyc08g005870.2.1

Solyc08g005870.2.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0087730 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005870.2.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00022p00252530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00038p00150140 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.03 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.04 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.02 Archaeplastida
AT1G74430 ATMYBCP66, MYB95, ATMYB95 myb domain protein 95 0.03 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.03 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.04 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.05 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.03 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.04 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.04 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.03 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.07 Archaeplastida
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.03 Archaeplastida
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.07 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.04 Archaeplastida
Cre02.g108350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre16.g686250 No alias No description available 0.02 Archaeplastida
GSVIVT01000449001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01012777001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013735001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01014454001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035459001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_11316 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g50720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g18480.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g26130.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g27090.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g39470.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g07640.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10048467g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_10431610g0040 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_179894g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp1g17210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c15_24080V3.1 No alias myb domain protein 33 0.02 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c26_1390V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo84195 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo84369 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo98669 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo99462 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.03 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g008670.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001404_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e001409_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004115_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e012681_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020754_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028201_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e028886_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030775_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e038356_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041551_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 111
IPR001005 SANT/Myb 14 62
No external refs found!