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  5. Solyc08g005970.3.1

Solyc08g005970.3.1


Description : arginine methyltransferase (PRMT5). histone methylase (CAU1)


Gene families : OG0004699 (Archaeplastida) Phylogenetic Tree(s): OG0004699_tree ,
OG_05_0005017 (LandPlants) Phylogenetic Tree(s): OG_05_0005017_tree ,
OG_06_0006404 (SeedPlants) Phylogenetic Tree(s): OG_06_0006404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005970.3.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT4G31120 ATPRMT5, PRMT5, SKB1 SHK1 binding protein 1 0.05 Archaeplastida
Cpa|evm.model.tig00021350.20 No alias External stimuli response.drought.stomatal closure... 0.01 Archaeplastida
Gb_23660 No alias arginine methyltransferase (PRMT5). histone methylase (CAU1) 0.03 Archaeplastida
LOC_Os02g04660.1 No alias arginine methyltransferase (PRMT5). histone methylase (CAU1) 0.04 Archaeplastida
MA_7691823g0010 No alias arginine methyltransferase (PRMT5). histone methylase (CAU1) 0.02 Archaeplastida
MA_899153g0010 No alias histone methylase (CAU1) 0.03 Archaeplastida
Mp4g20270.1 No alias arginine methyltransferase (PRMT5). histone methylase (CAU1) 0.03 Archaeplastida
Smo183431 No alias External stimuli response.drought.stomatal closure... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005956 protein kinase CK2 complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009584 detection of visible light IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018298 protein-chromophore linkage IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR035075 PRMT5 315 484
IPR035247 PRMT5_TIM 38 309
IPR035248 PRMT5_C 487 653
No external refs found!