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  5. Solyc08g006295.1.1

Solyc08g006295.1.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0000684 (SeedPlants) Phylogenetic Tree(s): OG_06_0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g006295.1.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00223190 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT2G24450 FLA3 FASCICLIN-like arabinogalactan protein 3 precursor 0.04 Archaeplastida
AT3G60900 FLA10 FASCICLIN-like arabinogalactan-protein 10 0.03 Archaeplastida
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.05 Archaeplastida
GSVIVT01014684001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01030085001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
LOC_Os02g26320.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os03g03600.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os08g23180.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os09g07350.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
MA_137299g0010 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
MA_55418g0010 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Mp4g14280.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Mp5g05430.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05440.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05450.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05460.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Pp3c26_5590V3.1 No alias Fasciclin-like arabinogalactan family protein 0.03 Archaeplastida
Pp3c4_16840V3.1 No alias FASCICLIN-like arabinogalactan protein 8 0.03 Archaeplastida
Solyc12g006110.3.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e014115_P001 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Zm00001e033729_P002 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e036843_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 33 133
No external refs found!