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  5. Solyc08g006460.3.1

Solyc08g006460.3.1


Description : Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica (sp|q7xtv7|hip1_orysj : 132.0)


Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0000151 (LandPlants) Phylogenetic Tree(s): OG_05_0000151_tree ,
OG_06_0000175 (SeedPlants) Phylogenetic Tree(s): OG_06_0000175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g006460.3.1
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032082001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_30059 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
LOC_Os08g43480.1 No alias E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.02 Archaeplastida
MA_20229g0010 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.04 Archaeplastida
MA_8313423g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c19_21510V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Zm00001e032327_P003 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 Archaeplastida
Zm00001e040092_P001 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 483 525
No external refs found!