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  5. Solyc08g007970.3.1

Solyc08g007970.3.1


Description : no hits & (original description: none)


Gene families : OG0000920 (Archaeplastida) Phylogenetic Tree(s): OG0000920_tree ,
OG_05_0000667 (LandPlants) Phylogenetic Tree(s): OG_05_0000667_tree ,
OG_06_0004178 (SeedPlants) Phylogenetic Tree(s): OG_06_0004178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g007970.3.1
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00022750 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT5G41140 No alias Myosin heavy chain-related protein 0.03 Archaeplastida
GSVIVT01008971001 No alias No description available 0.02 Archaeplastida
GSVIVT01033709001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
LOC_Os10g21940.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g008530.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019448 NT-C2 11 142
No external refs found!