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  5. Solyc08g008030.3.1

Solyc08g008030.3.1


Description : AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana (sp|q8gxb3|ahl5_arath : 169.0)


Gene families : OG0000405 (Archaeplastida) Phylogenetic Tree(s): OG0000405_tree ,
OG_05_0000251 (LandPlants) Phylogenetic Tree(s): OG_05_0000251_tree ,
OG_06_0000180 (SeedPlants) Phylogenetic Tree(s): OG_06_0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g008030.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00254660 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00149p00085280 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 10... 0.07 Archaeplastida
AT1G63470 No alias AT hook motif DNA-binding family protein 0.07 Archaeplastida
AT1G63480 No alias AT hook motif DNA-binding family protein 0.03 Archaeplastida
AT3G61310 No alias AT hook motif DNA-binding family protein 0.1 Archaeplastida
AT4G17950 No alias AT hook motif DNA-binding family protein 0.01 Archaeplastida
AT5G51590 No alias AT hook motif DNA-binding family protein 0.03 Archaeplastida
GSVIVT01013426001 No alias AT-hook motif nuclear-localized protein 10... 0.06 Archaeplastida
GSVIVT01018513001 No alias AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01026888001 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01027617001 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_40521 No alias AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida
LOC_Os02g57820.1 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os10g42230.2 No alias AT-hook motif nuclear-localized protein 10... 0.04 Archaeplastida
MA_19947g0030 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_359293g0010 No alias AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida
Pp3c3_20570V3.1 No alias AT-hook motif nuclear-localized protein 1 0.02 Archaeplastida
Solyc08g007530.4.1 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e009148_P001 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e016260_P002 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e023546_P003 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e037798_P002 No alias AT-hook motif nuclear-localized protein 10... 0.03 Archaeplastida
Zm00001e041401_P002 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 166 281
No external refs found!