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  5. Solyc08g008060.1.1

Solyc08g008060.1.1


Description : component Tic32 of inner envelope TIC translocation system


Gene families : OG0000289 (Archaeplastida) Phylogenetic Tree(s): OG0000289_tree ,
OG_05_0000631 (LandPlants) Phylogenetic Tree(s): OG_05_0000631_tree ,
OG_06_0001357 (SeedPlants) Phylogenetic Tree(s): OG_06_0001357_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g008060.1.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AT4G23420 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.04 Archaeplastida
LOC_Os01g05840.2 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
LOC_Os03g02460.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Smo85319 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Solyc06g071610.3.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.05 Archaeplastida
Zm00001e016903_P001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 31 178
No external refs found!