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  5. Solyc08g008660.4.1

Solyc08g008660.4.1


Description : transcription factor (NAC)


Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000168 (SeedPlants) Phylogenetic Tree(s): OG_06_0000168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g008660.4.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00251570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00025p00174590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00044p00058470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
AMTR_s00044p00058960 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
AMTR_s00058p00136280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.06 Archaeplastida
AMTR_s00068p00207380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00079p00099620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.07 Archaeplastida
AMTR_s00092p00142980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00113p00077540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.14 Archaeplastida
AT1G12260 EMB2749,... NAC 007 0.06 Archaeplastida
AT1G32510 NAC011, ANAC011 NAC domain containing protein 11 0.04 Archaeplastida
AT1G32770 ANAC012, NST3,... NAC domain containing protein 12 0.24 Archaeplastida
AT1G33280 BRN1, ANAC015, NAC015 NAC domain containing protein 15 0.05 Archaeplastida
AT1G52890 ANAC019, NAC019 NAC domain containing protein 19 0.03 Archaeplastida
AT1G62700 VND5, ANAC026 Arabidopsis NAC domain containing protein 26 0.06 Archaeplastida
AT1G71930 ANAC030, VND7 vascular related NAC-domain protein 7 0.06 Archaeplastida
AT1G76420 ANAC031, NAC368, CUC3 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT1G79580 SMB, ANAC033 NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT2G43000 NAC042, anac042 NAC domain containing protein 42 0.04 Archaeplastida
AT2G46770 NST1, ANAC043, EMB2301 NAC (No Apical Meristem) domain transcriptional... 0.24 Archaeplastida
AT3G04070 anac047, NAC047 NAC domain containing protein 47 0.04 Archaeplastida
AT3G12910 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G12977 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G15170 ANAC054, ATNAC1, CUC1 NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
AT3G15500 ATNAC3, ANAC055,... NAC domain containing protein 3 0.03 Archaeplastida
AT3G61910 NST2, NAC066, ANAC066 NAC domain protein 66 0.26 Archaeplastida
AT4G10350 ANAC070, BRN2, NAC070 NAC domain containing protein 70 0.04 Archaeplastida
AT4G17980 anac071, NAC071 NAC domain containing protein 71 0.04 Archaeplastida
AT4G28530 anac074, NAC074 NAC domain containing protein 74 0.04 Archaeplastida
AT4G36160 VND2, NAC076, ANAC076 NAC domain containing protein 76 0.06 Archaeplastida
AT5G04400 NAC077, anac077 NAC domain containing protein 77 0.03 Archaeplastida
AT5G46590 anac096, NAC096 NAC domain containing protein 96 0.04 Archaeplastida
AT5G62380 NAC101, VND6, ANAC101 NAC-domain protein 101 0.04 Archaeplastida
GSVIVT01001264001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01008291001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.08 Archaeplastida
GSVIVT01013419001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01014287001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01014405001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01016176001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01018623001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01018809001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.2 Archaeplastida
GSVIVT01019670001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.15 Archaeplastida
GSVIVT01020384001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01020389001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01027431001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.14 Archaeplastida
GSVIVT01029392001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01034485001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01035554001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.08 Archaeplastida
Gb_01126 No alias transcription factor (NAC) 0.05 Archaeplastida
Gb_07132 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_12203 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_13957 No alias transcription factor (NAC) 0.08 Archaeplastida
Gb_27819 No alias transcription factor (KNOX). transcription factor (NAC) 0.01 Archaeplastida
Gb_35309 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_37720 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_41026 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_41742 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os02g15340.1 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os02g41450.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os02g56600.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os03g42630.1 No alias transcription factor (NAC) 0.07 Archaeplastida
LOC_Os04g38720.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os04g43560.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os05g34600.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os06g04090.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os06g33940.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os07g04560.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os07g37920.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os07g48550.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os08g01330.1 No alias transcription factor (NAC) 0.01 Archaeplastida
LOC_Os08g02300.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os11g03370.1 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_123846g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_138461g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_15204g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_18939g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_1948g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_21732g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_23113g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_33912g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_40991g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_5017g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_6777g0010 No alias No annotation 0.08 Archaeplastida
MA_95225g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp6g20920.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Pp3c26_13950V3.1 No alias NAC 007 0.03 Archaeplastida
Pp3c3_25610V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
Solyc06g065410.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc11g018660.2.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc12g036480.2.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e000149_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e000198_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e002416_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e003559_P003 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e004141_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e005094_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e005863_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e006914_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e007411_P001 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e007505_P001 No alias transcription factor (NAC) 0.01 Archaeplastida
Zm00001e007905_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e010094_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e012429_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e014291_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e019017_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e022155_P001 No alias transcription factor (NAC) 0.1 Archaeplastida
Zm00001e023019_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e023108_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e029116_P001 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e029194_P001 No alias transcription factor (NAC) 0.07 Archaeplastida
Zm00001e029913_P001 No alias transcription factor (NAC) 0.12 Archaeplastida
Zm00001e031694_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e034574_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e034913_P002 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e034914_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e036590_P001 No alias transcription factor (NAC) 0.1 Archaeplastida
Zm00001e036720_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e037088_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e039557_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e041236_P002 No alias transcription factor (NAC) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR003441 NAC-dom 12 139
No external refs found!