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Description : transcription factor (RAV/NGATHA)
Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0000986 (SeedPlants) Phylogenetic Tree(s): OG_06_0000986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc08g013690.1.1 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G68840 | EDF2, AtRAV2,... | related to ABI3/VP1 2 | 0.03 | Archaeplastida | |
| AT2G46870 | NGA1 | AP2/B3-like transcriptional factor family protein | 0.03 | Archaeplastida | |
| GSVIVT01011947001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
| GSVIVT01019699001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
| GSVIVT01033902001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
| GSVIVT01036447001 | No alias | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.04 | Archaeplastida | |
| LOC_Os01g04800.1 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | Archaeplastida | |
| LOC_Os01g49830.1 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | Archaeplastida | |
| LOC_Os05g47650.1 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | Archaeplastida | |
| LOC_Os06g01860.1 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
| LOC_Os11g05740.1 | No alias | transcription factor (RAV/NGATHA) | 0.04 | Archaeplastida | |
| LOC_Os12g06080.1 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
| MA_10436315g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | Archaeplastida | |
| MA_18923g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | Archaeplastida | |
| MA_246350g0010 | No alias | transcription factor (RAV/NGATHA) | 0.03 | Archaeplastida | |
| MA_3834g0010 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
| MA_865117g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | Archaeplastida | |
| MA_953813g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Pp3c1_16700V3.1 | No alias | related to ABI3/VP1 1 | 0.04 | Archaeplastida | |
| Pp3c2_23660V3.1 | No alias | AP2/B3 transcription factor family protein | 0.05 | Archaeplastida | |
| Zm00001e000156_P001 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
| Zm00001e007152_P001 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
| Zm00001e024165_P001 | No alias | transcription factor (RAV/NGATHA) | 0.03 | Archaeplastida | |
| Zm00001e040214_P001 | No alias | transcription factor (RAV/NGATHA) | 0.03 | Archaeplastida | |
| Zm00001e041372_P001 | No alias | transcription factor (RAV/NGATHA) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | Neighborhood |
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Neighborhood |
| BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009606 | tropism | IEP | Neighborhood |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009733 | response to auxin | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| BP | GO:0010274 | hydrotropism | IEP | Neighborhood |
| MF | GO:0016229 | steroid dehydrogenase activity | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Neighborhood |
| MF | GO:0019842 | vitamin binding | IEP | Neighborhood |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Neighborhood |
| MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| MF | GO:0070279 | vitamin B6 binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003340 | B3_DNA-bd | 53 | 158 |
| No external refs found! |