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  5. Solyc08g014030.1.1

Solyc08g014030.1.1


Description : transcription factor (GRAS). SHR gravity signalling transcription factor


Gene families : OG0006923 (Archaeplastida) Phylogenetic Tree(s): OG0006923_tree ,
OG_05_0004840 (LandPlants) Phylogenetic Tree(s): OG_05_0004840_tree ,
OG_06_0004404 (SeedPlants) Phylogenetic Tree(s): OG_06_0004404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g014030.1.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00182770 evm_27.TU.AmTr_v1... External stimuli response.gravity.sensing and... 0.03 Archaeplastida
AT4G37650 SHR, SGR7 GRAS family transcription factor 0.03 Archaeplastida
LOC_Os03g31880.1 No alias transcription factor (GRAS). SHR gravity signalling... 0.05 Archaeplastida
LOC_Os07g39820.1 No alias transcription factor (GRAS). SHR gravity signalling... 0.05 Archaeplastida
MA_99004g0010 No alias transcription factor (GRAS) 0.03 Archaeplastida
Pp3c7_24880V3.1 No alias GRAS family transcription factor 0.03 Archaeplastida
Solyc02g092370.1.1 No alias transcription factor (GRAS). SHR gravity signalling... 0.1 Archaeplastida
Zm00001e002085_P001 No alias transcription factor (GRAS). SHR gravity signalling... 0.03 Archaeplastida
Zm00001e010666_P001 No alias transcription factor (GRAS). SHR gravity signalling... 0.02 Archaeplastida
Zm00001e035411_P001 No alias transcription factor (GRAS). SHR gravity signalling... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 32 408
No external refs found!