1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g014390.1.1

Solyc08g014390.1.1


Description : DNA-directed RNA polymerase subunit beta OS=Nicotiana sylvestris (sp|q3c1g8|rpoc1_nicsy : 116.0)


Gene families : OG0000707 (Archaeplastida) Phylogenetic Tree(s): OG0000707_tree ,
OG_05_0002942 (LandPlants) Phylogenetic Tree(s): OG_05_0002942_tree ,
OG_06_0002537 (SeedPlants) Phylogenetic Tree(s): OG_06_0002537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g014390.1.1

Target Alias Description ECC score Gene Family Method Actions
ATCG00170 RPOC2 DNA-directed RNA polymerase family protein 0.04 Archaeplastida
ATCG00180 RPOC1 DNA-directed RNA polymerase family protein 0.04 Archaeplastida
LOC_Os02g24614.1 No alias RpoC1 core component plastid-encoded RNA polymerase 0.05 Archaeplastida
LOC_Os04g16830.1 No alias DNA-directed RNA polymerase subunit beta OS=Oryza sativa... 0.03 Archaeplastida
Solyc01g017370.2.1 No alias DNA-directed RNA polymerase subunit beta OS=Nicotiana... 0.04 Archaeplastida
Solyc10g011720.1.1 No alias DNA-directed RNA polymerase subunit beta OS=Solanum... 0.02 Archaeplastida
Solyc12g096910.1.1 No alias DNA-directed RNA polymerase subunit beta OS=Nicotiana... 0.17 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!