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  5. AMTR_s00029p00088690

AMTR_s00029p00088690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.81

Description : Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type)


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0005106 (LandPlants) Phylogenetic Tree(s): OG_05_0005106_tree ,
OG_06_0004065 (SeedPlants) Phylogenetic Tree(s): OG_06_0004065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00088690
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT5G41000 YSL4 YELLOW STRIPE like 4 0.02 Archaeplastida
GSVIVT01012035001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
GSVIVT01019646001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
GSVIVT01029329001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
LOC_Os04g45900.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
LOC_Os05g16290.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_8914283g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_924600g0010 No alias Probable metal-nicotianamine transporter YSL6... 0.02 Archaeplastida
Zm00001e007544_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e023053_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 14 347
No external refs found!