- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 135.0)
Gene families : OG0000940 (Archaeplastida) Phylogenetic Tree(s): OG0000940_tree ,
OG_05_0000578 (LandPlants) Phylogenetic Tree(s): OG_05_0000578_tree ,
OG_06_0000281 (SeedPlants) Phylogenetic Tree(s): OG_06_0000281_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc08g014612.1.1 | |
| Cluster | HCCA: Cluster_113 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Solyc01g066065.1.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc01g067403.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.02 | Archaeplastida | |
| Solyc02g077865.1.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Solyc02g082125.1.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc02g090397.1.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Solyc03g083965.1.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc04g053033.1.1 | No alias | No annotation | 0.08 | Archaeplastida | |
| Solyc04g074865.1.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Solyc05g050887.1.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Solyc05g051385.1.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Solyc06g009015.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.05 | Archaeplastida | |
| Solyc07g009477.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.04 | Archaeplastida | |
| Solyc07g018023.1.1 | No alias | Uncharacterized mitochondrial protein AtMg00810... | 0.03 | Archaeplastida | |
| Solyc07g019433.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.02 | Archaeplastida | |
| Solyc08g066927.1.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Solyc08g083385.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
| Solyc10g051255.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.02 | Archaeplastida | |
| Solyc10g085205.1.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Solyc12g039205.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Neighborhood |
| MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Neighborhood |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Neighborhood |
| BP | GO:0006030 | chitin metabolic process | IEP | Neighborhood |
| BP | GO:0006032 | chitin catabolic process | IEP | Neighborhood |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0009060 | aerobic respiration | IEP | Neighborhood |
| MF | GO:0015002 | heme-copper terminal oxidase activity | IEP | Neighborhood |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Neighborhood |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Neighborhood |
| MF | GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Neighborhood |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Neighborhood |
| BP | GO:0045333 | cellular respiration | IEP | Neighborhood |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Neighborhood |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |