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  5. Solyc08g015965.1.1

Solyc08g015965.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 92.0)


Gene families : OG0000375 (Archaeplastida) Phylogenetic Tree(s): OG0000375_tree ,
OG_05_0000187 (LandPlants) Phylogenetic Tree(s): OG_05_0000187_tree ,
OG_06_0000080 (SeedPlants) Phylogenetic Tree(s): OG_06_0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g015965.1.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Solyc05g048755.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g065525.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida
Solyc10g011685.1.1 No alias No annotation 0.03 Archaeplastida
Solyc10g044988.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida
Solyc12g019235.1.1 No alias No annotation 0.01 Archaeplastida
Solyc12g044958.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005548 phospholipid transporter activity IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!