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  5. Solyc08g028750.1.1

Solyc08g028750.1.1


Description : no hits & (original description: none)


Gene families : OG0001479 (Archaeplastida) Phylogenetic Tree(s): OG0001479_tree ,
OG_05_0001081 (LandPlants) Phylogenetic Tree(s): OG_05_0001081_tree ,
OG_06_0001102 (SeedPlants) Phylogenetic Tree(s): OG_06_0001102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g028750.1.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00108130 evm_27.TU.AmTr_v1... DNA-directed RNA polymerase subunit beta OS=Amborella trichopoda 0.02 Archaeplastida
AMTR_s00626p00011520 evm_27.TU.AmTr_v1... DNA-directed RNA polymerase subunit beta OS=Morus indica 0.02 Archaeplastida
Gb_02251 No alias RpoB core component plastid-encoded RNA polymerase 0.03 Archaeplastida
Gb_06830 No alias DNA-directed RNA polymerase subunit beta OS=Pinus... 0.03 Archaeplastida
LOC_Os04g16820.1 No alias RpoB core component plastid-encoded RNA polymerase 0.02 Archaeplastida
LOC_Os05g22860.1 No alias DNA-directed RNA polymerase subunit beta OS=Oryza sativa... 0.03 Archaeplastida
Mp1g13170.1 No alias DNA-directed RNA polymerase subunit beta OS=Marchantia... 0.03 Archaeplastida
Mp6g01430.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g21490.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!