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  5. Solyc08g041685.1.1

Solyc08g041685.1.1


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 127.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001291 (LandPlants) Phylogenetic Tree(s): OG_05_0001291_tree ,
OG_06_0001454 (SeedPlants) Phylogenetic Tree(s): OG_06_0001454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g041685.1.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.17 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrSy.fgenesh.mRNA.34 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrSy.fgenesh.mRNA.38 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrSy.fgenesh.mRNA.40 No alias no hits & (original description: none) 0.02 Archaeplastida
ChrUn.fgenesh.mRNA.12 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.15 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
ChrUn.fgenesh.mRNA.51 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Cre01.g006402 No alias No description available 0.02 Archaeplastida
Gb_00235 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_03960 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_09706 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_10114 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_10780 No alias Uncharacterized mitochondrial protein AtMg00860... 0.02 Archaeplastida
Gb_12173 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_12464 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_14060 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_14370 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_14507 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_14590 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_14609 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_18694 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_18703 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_18710 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_18721 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_20044 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_21108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.02 Archaeplastida
Gb_22113 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_23759 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_26761 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_28570 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_30475 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_30891 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_32988 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_35176 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_37445 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Pp3c3_35120V3.1 No alias No annotation 0.02 Archaeplastida
Solyc01g056575.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Solyc02g044005.1.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida
Solyc07g017905.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g150114.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Solyc12g062826.1.1 No alias Uncharacterized mitochondrial protein AtMg00860... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000477 RT_dom 9 124
No external refs found!