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  5. Solyc08g041890.4.1

Solyc08g041890.4.1


Description : importin alpha adaptor proteins


Gene families : OG0001194 (Archaeplastida) Phylogenetic Tree(s): OG0001194_tree ,
OG_05_0001449 (LandPlants) Phylogenetic Tree(s): OG_05_0001449_tree ,
OG_06_0001631 (SeedPlants) Phylogenetic Tree(s): OG_06_0001631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g041890.4.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00043750 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
GSVIVT01031205001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
MA_92132g0010 No alias importin alpha adaptor proteins 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006606 protein import into nucleus IEA Interproscan
MF GO:0061608 nuclear import signal receptor activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR032413 Arm_3 456 502
IPR000225 Armadillo 274 312
IPR000225 Armadillo 402 439
IPR000225 Armadillo 148 186
IPR000225 Armadillo 316 356
IPR000225 Armadillo 243 271
IPR000225 Armadillo 105 145
IPR000225 Armadillo 189 230
IPR000225 Armadillo 358 397
IPR002652 Importin-a_IBB 12 94
No external refs found!