1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00029p00109650

AMTR_s00029p00109650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.115

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.BTB/POZ substrate adaptor components.BPH1 component


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0001999 (LandPlants) Phylogenetic Tree(s): OG_05_0001999_tree ,
OG_06_0002247 (SeedPlants) Phylogenetic Tree(s): OG_06_0002247_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00109650
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00182270 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g66560... 0.04 Archaeplastida
AMTR_s00077p00161250 evm_27.TU.AmTr_v1... Root phototropism protein 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00137p00096710 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.06 Archaeplastida
AT3G08570 No alias Phototropic-responsive NPH3 family protein 0.06 Archaeplastida
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT4G37590 NPY5 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G48130 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT5G48800 No alias Phototropic-responsive NPH3 family protein 0.07 Archaeplastida
AT5G66560 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
GSVIVT01000400001 No alias BTB/POZ domain-containing protein At3g22104... 0.05 Archaeplastida
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.05 Archaeplastida
GSVIVT01027413001 No alias BTB/POZ domain-containing protein At5g17580... 0.03 Archaeplastida
GSVIVT01030043001 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
GSVIVT01037852001 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04489 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
Gb_15614 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
Gb_16231 No alias BTB/POZ domain-containing protein At1g67900... 0.04 Archaeplastida
Gb_34273 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os02g38120.1 No alias BTB/POZ domain-containing protein At1g67900... 0.04 Archaeplastida
LOC_Os03g10800.2 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g22600.1 No alias BTB/POZ domain-containing protein At1g03010... 0.04 Archaeplastida
LOC_Os03g52880.1 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os05g08530.1 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g08550.1 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os07g39530.1 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
LOC_Os09g09370.2 No alias BTB/POZ domain-containing protein At5g47800... 0.02 Archaeplastida
LOC_Os09g25330.1 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os12g41910.2 No alias BTB/POZ domain-containing protein At1g30440... 0.04 Archaeplastida
MA_135496g0010 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_178653g0010 No alias BTB/POZ domain-containing protein At3g22104... 0.03 Archaeplastida
MA_38486g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.04 Archaeplastida
MA_479907g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
MA_842546g0010 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
MA_89781g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.05 Archaeplastida
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.02 Archaeplastida
Pp3c3_37660V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Solyc01g107180.3.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.06 Archaeplastida
Solyc05g013570.3.1 No alias BTB/POZ domain-containing protein At1g67900... 0.05 Archaeplastida
Solyc07g048000.3.1 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Solyc09g061250.4.1 No alias BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
Solyc10g049660.2.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e000726_P002 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e005028_P001 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
Zm00001e011959_P001 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
Zm00001e033674_P003 No alias BTB/POZ domain-containing protein At5g47800... 0.05 Archaeplastida
Zm00001e036310_P001 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e038209_P001 No alias BTB/POZ domain-containing protein At1g03010... 0.07 Archaeplastida
Zm00001e039269_P001 No alias BTB/POZ domain-containing protein At3g08570... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 197 438
No external refs found!