1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g065350.4.1

Solyc08g065350.4.1


Description : class-III histone deacetylase


Gene families : OG0002207 (Archaeplastida) Phylogenetic Tree(s): OG0002207_tree ,
OG_05_0005340 (LandPlants) Phylogenetic Tree(s): OG_05_0005340_tree ,
OG_06_0006557 (SeedPlants) Phylogenetic Tree(s): OG_06_0006557_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g065350.4.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021590.7 No alias Chromatin organisation.histone modifications.histone... 0.01 Archaeplastida
MA_251409g0010 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 57 334
No external refs found!