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  4. Sequence
  5. Solyc08g065543.1.1

Solyc08g065543.1.1


Description : no hits & (original description: none)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g065543.1.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500094.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc01g065987.1.1 No alias No annotation 0.1 Archaeplastida
Solyc01g067045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc03g031487.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g111705.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc03g119905.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc04g150146.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc05g009275.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc06g034395.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc06g036255.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g019493.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Solyc07g044985.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Solyc09g074575.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Solyc09g150145.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Solyc10g008455.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!