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  5. Solyc08g065675.1.1

Solyc08g065675.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 93.6)


Gene families : OG0000375 (Archaeplastida) Phylogenetic Tree(s): OG0000375_tree ,
OG_05_0000187 (LandPlants) Phylogenetic Tree(s): OG_05_0000187_tree ,
OG_06_0000080 (SeedPlants) Phylogenetic Tree(s): OG_06_0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g065675.1.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500336.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc01g017675.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g057133.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g105763.1.1 No alias No annotation 0.02 Archaeplastida
Solyc02g076635.1.1 No alias No annotation 0.03 Archaeplastida
Solyc05g010755.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g048755.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g009785.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc06g031714.1.1 No alias No annotation 0.05 Archaeplastida
Solyc06g060627.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g061225.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc09g014765.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc09g031513.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g065525.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc10g044988.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc10g075177.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g081705.1.1 No alias No annotation 0.03 Archaeplastida
Solyc11g032025.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc12g013655.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g019235.1.1 No alias No annotation 0.02 Archaeplastida
Solyc12g045033.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!