Solyc08g065860.3.1


Description : no description available(sp|q65xs5|bc10_orysj : 163.0)


Gene families : OG0000189 (Archaeplastida) Phylogenetic Tree(s): OG0000189_tree ,
OG_05_0000499 (LandPlants) Phylogenetic Tree(s): OG_05_0000499_tree ,
OG_06_0000285 (SeedPlants) Phylogenetic Tree(s): OG_06_0000285_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g065860.3.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AT5G57270 No alias Core-2/I-branching... 0.03 Archaeplastida
GSVIVT01010878001 No alias No description available 0.02 Archaeplastida
GSVIVT01011858001 No alias No description available 0.02 Archaeplastida
GSVIVT01023157001 No alias No description available 0.04 Archaeplastida
GSVIVT01035340001 No alias No description available 0.03 Archaeplastida
LOC_Os02g07880.1 No alias no description available(sp|q65xs5|bc10_orysj : 174.0) 0.03 Archaeplastida
LOC_Os04g51794.2 No alias no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 Archaeplastida
MA_10432974g0010 No alias no description available(sp|q65xs5|bc10_orysj : 98.6) 0.03 Archaeplastida
MA_11883g0010 No alias no description available(sp|q65xs5|bc10_orysj : 160.0) 0.04 Archaeplastida
Pp3c16_11830V3.1 No alias Core-2/I-branching... 0.02 Archaeplastida
Pp3c24_4540V3.1 No alias Core-2/I-branching... 0.03 Archaeplastida
Zm00001e005574_P001 No alias no description available(sp|q65xs5|bc10_orysj : 162.0) 0.04 Archaeplastida
Zm00001e020077_P002 No alias no description available(sp|q65xs5|bc10_orysj : 329.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0005347 ATP transmembrane transporter activity IEP Neighborhood
MF GO:0005471 ATP:ADP antiporter activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015215 nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015217 ADP transmembrane transporter activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015301 anion:anion antiporter activity IEP Neighborhood
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
CC GO:0030014 CCR4-NOT complex IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 121 347
No external refs found!