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  5. Solyc08g066110.3.1

Solyc08g066110.3.1


Description : profilin actin nucleation protein


Gene families : OG0001070 (Archaeplastida) Phylogenetic Tree(s): OG0001070_tree ,
OG_05_0001188 (LandPlants) Phylogenetic Tree(s): OG_05_0001188_tree ,
OG_06_0001247 (SeedPlants) Phylogenetic Tree(s): OG_06_0001247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g066110.3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Cre10.g427250 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
GSVIVT01016960001 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
GSVIVT01035320001 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
Gb_11693 No alias profilin actin nucleation protein 0.03 Archaeplastida
LOC_Os06g05880.1 No alias profilin actin nucleation protein 0.03 Archaeplastida
LOC_Os10g17660.1 No alias profilin actin nucleation protein 0.02 Archaeplastida
LOC_Os10g17680.1 No alias profilin actin nucleation protein 0.02 Archaeplastida
MA_534242g0010 No alias profilin actin nucleation protein 0.03 Archaeplastida
Smo148414 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
Zm00001e027449_P001 No alias profilin actin nucleation protein 0.03 Archaeplastida
Zm00001e032207_P001 No alias profilin actin nucleation protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005455 PFN 1 130
No external refs found!