Solyc08g066140.3.1


Description : no hits & (original description: none)


Gene families : OG0001869 (Archaeplastida) Phylogenetic Tree(s): OG0001869_tree ,
OG_05_0002404 (LandPlants) Phylogenetic Tree(s): OG_05_0002404_tree ,
OG_06_0008999 (SeedPlants) Phylogenetic Tree(s): OG_06_0008999_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g066140.3.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00095690 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.07 Archaeplastida
AT3G03710 RIF10, PNP polyribonucleotide nucleotidyltransferase, putative 0.1 Archaeplastida
GSVIVT01029958001 No alias RNA processing.organelle machineries.ribonuclease... 0.1 Archaeplastida
Gb_15670 No alias polynucleotide phosphorylase (PNP) 0.04 Archaeplastida
LOC_Os07g07310.1 No alias polynucleotide phosphorylase (PNP) 0.02 Archaeplastida
Mp4g17520.1 No alias polynucleotide phosphorylase (PNP) 0.05 Archaeplastida
Pp3c6_15550V3.1 No alias polyribonucleotide nucleotidyltransferase, putative 0.06 Archaeplastida
Smo77425 No alias RNA processing.organelle machineries.ribonuclease... 0.03 Archaeplastida
Zm00001e032889_P001 No alias polynucleotide phosphorylase (PNP) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!