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  5. Solyc08g066550.3.1

Solyc08g066550.3.1


Description : no hits & (original description: none)


Gene families : OG0007038 (Archaeplastida) Phylogenetic Tree(s): OG0007038_tree ,
OG_05_0008430 (LandPlants) Phylogenetic Tree(s): OG_05_0008430_tree ,
OG_06_0009567 (SeedPlants) Phylogenetic Tree(s): OG_06_0009567_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g066550.3.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00099260 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT5G11620 No alias SWIM zinc finger family protein / mitogen-activated... 0.27 Archaeplastida
LOC_Os06g36030.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e037240_P001 No alias no hits & (original description: none) 0.17 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 61 89
IPR001841 Znf_RING 155 202
No external refs found!