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  5. AMTR_s00029p00153730

AMTR_s00029p00153730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.182

Description : Vesicle trafficking.clathrin-independent machinery.Flotillin-like protein


Gene families : OG0002470 (Archaeplastida) Phylogenetic Tree(s): OG0002470_tree ,
OG_05_0001953 (LandPlants) Phylogenetic Tree(s): OG_05_0001953_tree ,
OG_06_0001770 (SeedPlants) Phylogenetic Tree(s): OG_06_0001770_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00153730
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Zm00001e012661_P001 No alias Flotillin-class protein 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!