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  5. Solyc08g075060.4.1

Solyc08g075060.4.1


Description : pectin acetylesterase


Gene families : OG0000465 (Archaeplastida) Phylogenetic Tree(s): OG0000465_tree ,
OG_05_0000277 (LandPlants) Phylogenetic Tree(s): OG_05_0000277_tree ,
OG_06_0004039 (SeedPlants) Phylogenetic Tree(s): OG_06_0004039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g075060.4.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT3G09405 No alias Pectinacetylesterase family protein 0.06 Archaeplastida
LOC_Os01g66840.1 No alias pectin acetylesterase 0.03 Archaeplastida
LOC_Os10g40290.1 No alias Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_3303g0010 No alias pectin acetylesterase 0.02 Archaeplastida
Solyc10g050750.3.1 No alias pectin acetylesterase 0.09 Archaeplastida
Zm00001e017068_P001 No alias pectin acetylesterase 0.03 Archaeplastida
Zm00001e017534_P003 No alias Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e028575_P002 No alias pectin acetylesterase 0.03 Archaeplastida
Zm00001e035651_P001 No alias pectin acetylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 5 293
No external refs found!