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Description : component FBX of SCF E3 ubiquitin ligase complex
Gene families : OG0005579 (Archaeplastida) Phylogenetic Tree(s): OG0005579_tree ,
OG_05_0005844 (LandPlants) Phylogenetic Tree(s): OG_05_0005844_tree ,
OG_06_0007363 (SeedPlants) Phylogenetic Tree(s): OG_06_0007363_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc08g075380.3.1 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001239.3 | No alias | No description available | 0.01 | Archaeplastida | |
| LOC_Os06g49530.1 | No alias | component FBX of SCF E3 ubiquitin ligase complex | 0.03 | Archaeplastida | |
| Smo82832 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003729 | mRNA binding | IEP | Neighborhood |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| CC | GO:0005685 | U1 snRNP | IEP | Neighborhood |
| CC | GO:0005956 | protein kinase CK2 complex | IEP | Neighborhood |
| BP | GO:0006376 | mRNA splice site selection | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Neighborhood |
| MF | GO:0019207 | kinase regulator activity | IEP | Neighborhood |
| MF | GO:0019239 | deaminase activity | IEP | Neighborhood |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Neighborhood |
| BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
| MF | GO:0030145 | manganese ion binding | IEP | Neighborhood |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0043248 | proteasome assembly | IEP | Neighborhood |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| MF | GO:0071949 | FAD binding | IEP | Neighborhood |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001810 | F-box_dom | 170 | 214 |
| No external refs found! |