1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g075480.4.1

Solyc08g075480.4.1


Description : carotenoid cleavage dioxygenase (CCD4)


Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0000908 (LandPlants) Phylogenetic Tree(s): OG_05_0000908_tree ,
OG_06_0003873 (SeedPlants) Phylogenetic Tree(s): OG_06_0003873_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g075480.4.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256590 evm_27.TU.AmTr_v1... Zeaxanthin 7,8(7,8)-cleavage dioxygenase, chromoplastic... 0.07 Archaeplastida
AMTR_s00011p00256600 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00022p00253450 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
AMTR_s00039p00194530 evm_27.TU.AmTr_v1... Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.03 Archaeplastida
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.04 Archaeplastida
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.03 Archaeplastida
AT3G24220 NCED6, ATNCED6 nine-cis-epoxycarotenoid dioxygenase 6 0.03 Archaeplastida
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.04 Archaeplastida
GSVIVT01036862001 No alias Probable carotenoid cleavage dioxygenase 4,... 0.02 Archaeplastida
Gb_04986 No alias carotenoid cleavage dioxygenase (CCD4) 0.05 Archaeplastida
Gb_07367 No alias carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.04 Archaeplastida
Gb_14132 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 Archaeplastida
Gb_33714 No alias carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.02 Archaeplastida
Gb_41235 No alias carotenoid cleavage dioxygenase (CCD4) 0.04 Archaeplastida
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.04 Archaeplastida
LOC_Os07g05940.1 No alias neoxanthin cleavage protein 0.02 Archaeplastida
LOC_Os12g44310.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.03 Archaeplastida
Mp8g04080.1 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.02 Archaeplastida
Smo75383 No alias Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.02 Archaeplastida
Smo94524 No alias 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic... 0.03 Archaeplastida
Solyc05g053530.1.1 No alias neoxanthin cleavage protein 0.07 Archaeplastida
Solyc08g075490.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.05 Archaeplastida
Zm00001e032833_P001 No alias neoxanthin cleavage protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 102 569
No external refs found!