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  5. Solyc08g075490.4.1

Solyc08g075490.4.1


Description : carotenoid cleavage dioxygenase (CCD4)


Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0000908 (LandPlants) Phylogenetic Tree(s): OG_05_0000908_tree ,
OG_06_0003873 (SeedPlants) Phylogenetic Tree(s): OG_06_0003873_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g075490.4.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.04 Archaeplastida
AT3G24220 NCED6, ATNCED6 nine-cis-epoxycarotenoid dioxygenase 6 0.04 Archaeplastida
AT4G19170 CCD4, NCED4 nine-cis-epoxycarotenoid dioxygenase 4 0.07 Archaeplastida
Cpa|evm.model.tig00001128.6 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00001208.11 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus sativus 0.02 Archaeplastida
Cre03.g149650 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1... 0.02 Archaeplastida
Gb_04986 No alias carotenoid cleavage dioxygenase (CCD4) 0.05 Archaeplastida
Gb_41235 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.05 Archaeplastida
LOC_Os12g44310.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.04 Archaeplastida
MA_10435932g0010 No alias carotenoid cleavage dioxygenase (CCD1) 0.03 Archaeplastida
MA_90573g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
Mp3g20700.1 No alias neoxanthin cleavage protein 0.04 Archaeplastida
Mp8g04090.1 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.03 Archaeplastida
Pp3c21_12920V3.1 No alias carotenoid cleavage dioxygenase 1 0.03 Archaeplastida
Pp3c22_6380V3.1 No alias carotenoid cleavage dioxygenase 1 0.06 Archaeplastida
Smo165469 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
Smo410484 No alias No description available 0.03 Archaeplastida
Solyc08g075480.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.05 Archaeplastida
Zm00001e015574_P001 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
Zm00001e032833_P001 No alias neoxanthin cleavage protein 0.04 Archaeplastida
Zm00001e038960_P002 No alias carotenoid cleavage dioxygenase (CCD1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 121 587
No external refs found!