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  5. Solyc08g075750.4.1

Solyc08g075750.4.1


Description : proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex


Gene families : OG0002435 (Archaeplastida) Phylogenetic Tree(s): OG0002435_tree ,
OG_05_0006809 (LandPlants) Phylogenetic Tree(s): OG_05_0006809_tree ,
OG_06_0009933 (SeedPlants) Phylogenetic Tree(s): OG_06_0009933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g075750.4.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00043000 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
AT5G45390 NCLPP4, CLPP4 CLP protease P4 0.08 Archaeplastida
Cre12.g500950 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
GSVIVT01020796001 No alias Protein degradation.peptidase families.serine-type... 0.1 Archaeplastida
GSVIVT01030894001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
LOC_Os01g32350.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.03 Archaeplastida
LOC_Os10g43050.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida
MA_140852g0010 No alias ATP-dependent Clp protease proteolytic subunit 4,... 0.02 Archaeplastida
MA_159916g0010 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida
MA_164820g0010 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida
Mp1g12460.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.06 Archaeplastida
Mp3g07790.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.05 Archaeplastida
Pp3c17_16820V3.1 No alias CLP protease proteolytic subunit 3 0.02 Archaeplastida
Pp3c5_27640V3.1 No alias CLP protease P4 0.04 Archaeplastida
Smo233821 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
Zm00001e002511_P002 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.09 Archaeplastida
Zm00001e026353_P001 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 89 262
No external refs found!