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  5. Solyc08g076850.3.1

Solyc08g076850.3.1


Description : Protein TORNADO 2 OS=Arabidopsis thaliana (sp|q9fiq5|trn2_arath : 355.0)


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g076850.3.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00136590 evm_27.TU.AmTr_v1... Tetraspanin-8 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT4G23410 TET5 tetraspanin5 0.05 Archaeplastida
GSVIVT01013147001 No alias Protein TORNADO 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01025122001 No alias Tetraspanin-3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_26509 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_100296g0010 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c8_3750V3.1 No alias tetraspanin10 0.03 Archaeplastida
Smo231326 No alias Tetraspanin-3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc07g006280.3.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e004417_P001 No alias Tetraspanin-10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e028243_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e030929_P001 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 6 250
No external refs found!