1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g077030.4.1

Solyc08g077030.4.1


Description : AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana (sp|o22812|ahl10_arath : 157.0)


Gene families : OG0000405 (Archaeplastida) Phylogenetic Tree(s): OG0000405_tree ,
OG_05_0000251 (LandPlants) Phylogenetic Tree(s): OG_05_0000251_tree ,
OG_06_0000180 (SeedPlants) Phylogenetic Tree(s): OG_06_0000180_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g077030.4.1
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00240090 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 14... 0.05 Archaeplastida
AMTR_s00009p00254660 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT4G00200 No alias AT hook motif DNA-binding family protein 0.03 Archaeplastida
AT5G51590 No alias AT hook motif DNA-binding family protein 0.03 Archaeplastida
GSVIVT01013200001 No alias AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01026888001 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_40521 No alias AT-hook motif nuclear-localized protein 10... 0.05 Archaeplastida
LOC_Os10g42230.2 No alias AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida
Zm00001e024390_P002 No alias AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 216 329
No external refs found!