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  5. AMTR_s00029p00167630

AMTR_s00029p00167630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.217

Description : Solute transport.carrier-mediated transport.MFS superfamily.OCT family.organic cation transporter (OCT-type)


Gene families : OG0001017 (Archaeplastida) Phylogenetic Tree(s): OG0001017_tree ,
OG_05_0000761 (LandPlants) Phylogenetic Tree(s): OG_05_0000761_tree ,
OG_06_0000885 (SeedPlants) Phylogenetic Tree(s): OG_06_0000885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00167630
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00126560 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.03 Archaeplastida
Gb_31020 No alias organic cation transporter (OCT) 0.02 Archaeplastida
LOC_Os01g22710.1 No alias organic cation transporter (OCT) 0.04 Archaeplastida
LOC_Os07g37454.1 No alias organic cation transporter (OCT) 0.02 Archaeplastida
LOC_Os07g37510.1 No alias organic cation transporter (OCT) 0.03 Archaeplastida
MA_29857g0020 No alias organic cation transporter (OCT) 0.04 Archaeplastida
MA_6288g0010 No alias organic cation transporter (OCT) 0.04 Archaeplastida
Solyc07g063920.3.1 No alias organic cation transporter (OCT) 0.02 Archaeplastida
Solyc08g081090.1.1 No alias organic cation transporter (OCT) 0.03 Archaeplastida
Solyc12g017380.3.1 No alias organic cation transporter (OCT) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 108 496
No external refs found!