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  5. Solyc08g077810.2.1

Solyc08g077810.2.1


Description : Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana (sp|q9lz20|caat6_arath : 165.0)


Gene families : OG0000547 (Archaeplastida) Phylogenetic Tree(s): OG0000547_tree ,
OG_05_0002054 (LandPlants) Phylogenetic Tree(s): OG_05_0002054_tree ,
OG_06_0001934 (SeedPlants) Phylogenetic Tree(s): OG_06_0001934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g077810.2.1
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00166780 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
AMTR_s00035p00052900 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
AT4G21120 AAT1, CAT1 amino acid transporter 1 0.03 Archaeplastida
GSVIVT01012155001 No alias Solute transport.carrier-mediated transport.APC... 0.05 Archaeplastida
GSVIVT01021611001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
LOC_Os03g43970.1 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida
LOC_Os06g34830.1 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Mp2g18210.1 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Mp5g21920.1 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Zm00001e005030_P001 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e030690_P001 No alias cationic amino acid transporter (CAT) 0.06 Archaeplastida
Zm00001e039396_P004 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR029485 CAT_C 145 193
No external refs found!