Description : PHD finger transcription factor
Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree ,
OG_05_0000582 (LandPlants) Phylogenetic Tree(s): OG_05_0000582_tree ,
OG_06_0088022 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc08g078120.2.1 | |
Cluster | HCCA: Cluster_163 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01024716001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.05 | Archaeplastida | |
GSVIVT01026454001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | Archaeplastida | |
LOC_Os01g73480.1 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
MA_202239g0010 | No alias | Increased DNA methylation 1 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
MA_62987g0010 | No alias | PHD finger transcription factor | 0.02 | Archaeplastida | |
Pp3c10_11240V3.1 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.02 | Archaeplastida | |
Smo23264 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | Archaeplastida | |
Zm00001e008083_P001 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.03 | Archaeplastida | |
Zm00001e031101_P001 | No alias | PHD finger transcription factor | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004180 | carboxypeptidase activity | IEP | Neighborhood |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Neighborhood |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
BP | GO:0010215 | cellulose microfibril organization | IEP | Neighborhood |
BP | GO:0015858 | nucleoside transport | IEP | Neighborhood |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0030198 | extracellular matrix organization | IEP | Neighborhood |
CC | GO:0031225 | anchored component of membrane | IEP | Neighborhood |
BP | GO:0043062 | extracellular structure organization | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
BP | GO:1901264 | carbohydrate derivative transport | IEP | Neighborhood |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Neighborhood |
BP | GO:1901642 | nucleoside transmembrane transport | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032308 | Jas | 122 | 190 |
No external refs found! |