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  5. Solyc08g078580.3.1

Solyc08g078580.3.1


Description : C2H2 zinc finger transcription factor. solute transporter (UmamiT)


Gene families : OG0007166 (Archaeplastida) Phylogenetic Tree(s): OG0007166_tree ,
OG_05_0005146 (LandPlants) Phylogenetic Tree(s): OG_05_0005146_tree ,
OG_06_0003343 (SeedPlants) Phylogenetic Tree(s): OG_06_0003343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g078580.3.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT5G47470 No alias Nodulin MtN21 /EamA-like transporter family protein 0.06 Archaeplastida
GSVIVT01004710001 No alias Solute transport.carrier-mediated transport.DMT... 0.03 Archaeplastida
Gb_30801 No alias solute transporter (UmamiT) 0.02 Archaeplastida
LOC_Os11g37720.1 No alias solute transporter (UmamiT) 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000620 EamA_dom 22 160
IPR000620 EamA_dom 190 329
No external refs found!