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  4. Sequence
  5. Solyc08g078870.3.1

Solyc08g078870.3.1


Description : no hits & (original description: none)


Gene families : OG0000205 (Archaeplastida) Phylogenetic Tree(s): OG0000205_tree ,
OG_05_0000094 (LandPlants) Phylogenetic Tree(s): OG_05_0000094_tree ,
OG_06_0000048 (SeedPlants) Phylogenetic Tree(s): OG_06_0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g078870.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G12090 ELP extensin-like protein 0.04 Archaeplastida
AT3G22120 CWLP cell wall-plasma membrane linker protein 0.03 Archaeplastida
AT4G12510 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT4G12520 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT4G12530 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT4G15160 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT5G46890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT5G46900 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
GSVIVT01001296001 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota 0.05 Archaeplastida
GSVIVT01001298001 No alias 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.03 Archaeplastida
Gb_13244 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_33165 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_40202 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 Archaeplastida
LOC_Os02g44310.1 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 Archaeplastida
LOC_Os02g44320.1 No alias Putative lipid-binding protein At4g00165 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os03g58670.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g46810.1 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 Archaeplastida
LOC_Os04g46830.1 No alias Putative lipid-binding protein At4g00165 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g43600.2 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g20890.1 No alias pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os10g40420.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g40430.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g40440.1 No alias Cortical cell-delineating protein OS=Zea mays... 0.04 Archaeplastida
LOC_Os10g40480.1 No alias Cortical cell-delineating protein OS=Zea mays... 0.05 Archaeplastida
LOC_Os10g40510.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g40520.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g40530.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g40614.1 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 Archaeplastida
Solyc03g083996.1.1 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.02 Archaeplastida
Solyc03g083998.1.1 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 Archaeplastida
Solyc06g065970.1.1 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.06 Archaeplastida
Solyc08g078910.1.1 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.04 Archaeplastida
Solyc08g078920.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002302_P001 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.02 Archaeplastida
Zm00001e006767_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037901_P001 No alias Cortical cell-delineating protein OS=Zea mays... 0.03 Archaeplastida
Zm00001e037902_P001 No alias Cortical cell-delineating protein OS=Zea mays... 0.02 Archaeplastida
Zm00001e041767_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR027923 Hydrophob_seed 62 146
No external refs found!