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  5. Solyc08g079110.4.1

Solyc08g079110.4.1


Description : Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana (sp|q8h1q1|tl203_arath : 315.0)


Gene families : OG0003909 (Archaeplastida) Phylogenetic Tree(s): OG0003909_tree ,
OG_05_0006822 (LandPlants) Phylogenetic Tree(s): OG_05_0006822_tree ,
OG_06_0010075 (SeedPlants) Phylogenetic Tree(s): OG_06_0010075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g079110.4.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT1G12250 No alias Pentapeptide repeat-containing protein 0.03 Archaeplastida
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 Archaeplastida
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 Archaeplastida
LOC_Os02g42960.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.09 Archaeplastida
MA_8855586g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp8g12430.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 Archaeplastida
Pp3c25_4010V3.1 No alias Pentapeptide repeat-containing protein 0.03 Archaeplastida
Smo96317 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004807 triose-phosphate isomerase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 118 154
IPR001646 5peptide_repeat 160 193
No external refs found!