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  5. Solyc08g079260.3.1

Solyc08g079260.3.1


Description : FAM10 family protein At4g22670 OS=Arabidopsis thaliana (sp|q93yr3|f10al_arath : 252.0)


Gene families : OG0004994 (Archaeplastida) Phylogenetic Tree(s): OG0004994_tree ,
OG_05_0003621 (LandPlants) Phylogenetic Tree(s): OG_05_0003621_tree ,
OG_06_0022743 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g079260.3.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00055560 evm_27.TU.AmTr_v1... FAM10 family protein At4g22670 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00001154.6 No alias FAM10 family protein At4g22670 OS=Arabidopsis thaliana 0.01 Archaeplastida
LOC_Os02g01030.1 No alias FAM10 family protein At4g22670 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_101038g0020 No alias TPR repeat-containing thioredoxin TDX OS=Oryza sativa... 0.05 Archaeplastida
Pp3c20_8620V3.1 No alias HSP70-interacting protein 1 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019734 TPR_repeat 161 191
IPR034649 Hip_N 2 43
No external refs found!