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  5. Solyc08g079620.3.1

Solyc08g079620.3.1


Description : proteolytic component ClpP2 of mitochondrion Clp-type protease complex


Gene families : OG0004396 (Archaeplastida) Phylogenetic Tree(s): OG0004396_tree ,
OG_05_0006357 (LandPlants) Phylogenetic Tree(s): OG_05_0006357_tree ,
OG_06_0008287 (SeedPlants) Phylogenetic Tree(s): OG_06_0008287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g079620.3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00056550 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
Cpa|evm.model.tig00000842.6 No alias ATP-dependent Clp protease proteolytic subunit... 0.02 Archaeplastida
Cpa|evm.model.tig00020563.155 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
Cre16.g682900 No alias Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
GSVIVT01019939001 No alias Protein degradation.peptidase families.serine-type... 0.06 Archaeplastida
Gb_34615 No alias proteolytic component ClpP2 of mitochondrion Clp-type... 0.03 Archaeplastida
LOC_Os06g04530.1 No alias proteolytic component ClpP2 of mitochondrion Clp-type... 0.06 Archaeplastida
Mp8g18340.1 No alias proteolytic component ClpP2 of mitochondrion Clp-type... 0.05 Archaeplastida
Pp3c3_12310V3.1 No alias CLP protease proteolytic subunit 2 0.06 Archaeplastida
Zm00001e036567_P002 No alias proteolytic component ClpP2 of mitochondrion Clp-type... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 96 271
No external refs found!