Solyc08g079770.3.1

Description : anion channel (SLAC)

Gene families : OG0000580 (Archaeplastida) Phylogenetic Tree(s): OG0000580_tree ,
OG_05_0000351 (LandPlants) Phylogenetic Tree(s): OG_05_0000351_tree ,
OG_06_0006209 (SeedPlants) Phylogenetic Tree(s): OG_06_0006209_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g079770.3.1
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00198820	evm_27.TU.AmTr_v1...	Solute transport.channels.SLAC anion channel	0.02	Archaeplastida
AT1G12480	RCD3, CDI3, SLAC1, OZS1	C4-dicarboxylate transporter/malic acid transport protein	0.03	Archaeplastida
GSVIVT01019915001	No alias	Solute transport.channels.SLAC anion channel	0.04	Archaeplastida
LOC_Os04g48530.1	No alias	anion channel (SLAC)	0.02	Archaeplastida
LOC_Os05g13320.1	No alias	anion channel (SLAC)	0.05	Archaeplastida
MA_175194g0010	No alias	anion channel (SLAC)	0.04	Archaeplastida
Smo122390	No alias	Solute transport.channels.SLAC anion channel	0.03	Archaeplastida
Solyc03g031590.4.1	No alias	anion channel (SLAC)	0.03	Archaeplastida
Zm00001e007191_P002	No alias	anion channel (SLAC)	0.04	Archaeplastida
Zm00001e018250_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004695	Voltage-dep_anion_channel	189	493

External Links

No external refs found!