1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00029p00180960

AMTR_s00029p00180960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.242

Description : Lipid metabolism.sphingolipid metabolism.glycosylinositol phosphorylceramide (GIPC) biosynthesis.inositol phosphorylceramide synthase (IPCS)


Gene families : OG0002543 (Archaeplastida) Phylogenetic Tree(s): OG0002543_tree ,
OG_05_0002104 (LandPlants) Phylogenetic Tree(s): OG_05_0002104_tree ,
OG_06_0002074 (SeedPlants) Phylogenetic Tree(s): OG_06_0002074_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00180960
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034044001 No alias Lipid metabolism.sphingolipid... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025749 Sphingomyelin_synth-like_dom 172 240
No external refs found!