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  5. AMTR_s00029p00183640

AMTR_s00029p00183640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.245

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000116 (LandPlants) Phylogenetic Tree(s): OG_05_0000116_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00183640
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009566001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g052850.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc11g072060.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e012156_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e015125_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028744_P002 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004348 glucosylceramidase activity IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006448 regulation of translational elongation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Neighborhood
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018202 peptidyl-histidine modification IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:2000765 regulation of cytoplasmic translation IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 9 54
IPR001005 SANT/Myb 61 105
No external refs found!