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  5. Solyc08g080730.3.1

Solyc08g080730.3.1


Description : Tetraspanin-10 OS=Arabidopsis thaliana (sp|f4i214|tet10_arath : 342.0)


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0008863 (SeedPlants) Phylogenetic Tree(s): OG_06_0008863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g080730.3.1
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os08g34460.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os10g35980.1 No alias Tetraspanin-10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g07130.1 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp6g10130.1 No alias Tetraspanin-10 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Pp3c8_3750V3.1 No alias tetraspanin10 0.03 Archaeplastida
Zm00001e004417_P001 No alias Tetraspanin-10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e027574_P006 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e028243_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 9 253
No external refs found!