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  4. Sequence
  5. Solyc08g080800.1.1

Solyc08g080800.1.1


Description : no hits & (original description: none)


Gene families : OG0006163 (Archaeplastida) Phylogenetic Tree(s): OG0006163_tree ,
OG_05_0004198 (LandPlants) Phylogenetic Tree(s): OG_05_0004198_tree ,
OG_06_0002697 (SeedPlants) Phylogenetic Tree(s): OG_06_0002697_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g080800.1.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019797001 No alias No description available 0.04 Archaeplastida
GSVIVT01019801001 No alias No description available 0.03 Archaeplastida
Solyc07g056325.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g056610.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g056704.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g056705.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g056706.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc07g056708.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc08g074870.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc08g080700.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g080790.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc08g080810.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g081020.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g098470.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 50 134
IPR004314 Neprosin 198 243
IPR004314 Neprosin 242 338
No external refs found!