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  5. Solyc08g080960.4.1

Solyc08g080960.4.1


Description : AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana (sp|q8gxb3|ahl5_arath : 154.0)


Gene families : OG0000405 (Archaeplastida) Phylogenetic Tree(s): OG0000405_tree ,
OG_05_0000251 (LandPlants) Phylogenetic Tree(s): OG_05_0000251_tree ,
OG_06_0000180 (SeedPlants) Phylogenetic Tree(s): OG_06_0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g080960.4.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00254660 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00149p00085280 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 10... 0.04 Archaeplastida
AT1G63470 No alias AT hook motif DNA-binding family protein 0.06 Archaeplastida
AT1G63480 No alias AT hook motif DNA-binding family protein 0.04 Archaeplastida
AT3G61310 No alias AT hook motif DNA-binding family protein 0.09 Archaeplastida
GSVIVT01013426001 No alias AT-hook motif nuclear-localized protein 10... 0.06 Archaeplastida
GSVIVT01026888001 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01027617001 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g57820.1 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os10g42230.2 No alias AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida
MA_19947g0030 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e003567_P004 No alias AT-hook motif nuclear-localized protein 10... 0.03 Archaeplastida
Zm00001e009148_P001 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e023546_P003 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e024114_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041401_P002 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 166 263
No external refs found!