Description : E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana (sp|q9sus5|rha1b_arath : 94.7)
Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc08g081370.1.1 | |
Cluster | HCCA: Cluster_64 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00263220 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
AMTR_s00059p00176670 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
AMTR_s00077p00074350 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
AT2G17450 | RHA3A | RING-H2 finger A3A | 0.03 | Archaeplastida | |
AT2G17730 | NIP2 | NEP-interacting protein 2 | 0.01 | Archaeplastida | |
AT2G37580 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
AT3G43430 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
AT3G61460 | BRH1 | brassinosteroid-responsive RING-H2 | 0.04 | Archaeplastida | |
AT4G11360 | RHA1B | RING-H2 finger A1B | 0.06 | Archaeplastida | |
AT4G33565 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
AT5G05280 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01018343001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
GSVIVT01027769001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
Gb_04642 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
Gb_14777 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
Gb_22087 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
Gb_32878 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
LOC_Os01g55110.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
LOC_Os01g64620.1 | No alias | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
LOC_Os02g14990.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
LOC_Os02g15080.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
LOC_Os02g36330.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
LOC_Os02g46600.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
LOC_Os04g16970.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
LOC_Os05g45060.1 | No alias | RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
LOC_Os08g43670.1 | No alias | NEP1-interacting protein 2 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
LOC_Os12g24490.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
LOC_Os12g42540.1 | No alias | RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Pp3c20_11600V3.1 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
Pp3c23_10580V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
Solyc02g038805.1.1 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
Solyc03g033330.3.1 | No alias | NEP1-interacting protein 1 OS=Arabidopsis thaliana... | 0.07 | Archaeplastida | |
Solyc12g087840.1.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
Zm00001e000398_P001 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
Zm00001e008560_P001 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
Zm00001e015259_P001 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
Zm00001e015805_P001 | No alias | NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... | 0.07 | Archaeplastida | |
Zm00001e016474_P001 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
Zm00001e022175_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
Zm00001e023585_P001 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
Zm00001e031874_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Zm00001e032196_P001 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida | |
Zm00001e034025_P001 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
Zm00001e034421_P001 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
Zm00001e034829_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 85 | 129 |
No external refs found! |