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  5. Solyc08g081505.1.1

Solyc08g081505.1.1


Description : no hits & (original description: none)


Gene families : OG0000810 (Archaeplastida) Phylogenetic Tree(s): OG0000810_tree ,
OG_05_0000712 (LandPlants) Phylogenetic Tree(s): OG_05_0000712_tree ,
OG_06_0000693 (SeedPlants) Phylogenetic Tree(s): OG_06_0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g081505.1.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00235430 No alias No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
CC GO:0030915 Smc5-Smc6 complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
CC GO:0106068 SUMO ligase complex IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 625 653
IPR018289 MULE_transposase_dom 372 464
IPR000270 PB1_dom 26 93
IPR004332 Transposase_MuDR 178 241
No external refs found!