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  5. Solyc08g081830.3.1

Solyc08g081830.3.1


Description : Uncharacterized protein At5g41620 OS=Arabidopsis thaliana (sp|q66gq2|y5162_arath : 354.0)


Gene families : OG0000632 (Archaeplastida) Phylogenetic Tree(s): OG0000632_tree ,
OG_05_0000355 (LandPlants) Phylogenetic Tree(s): OG_05_0000355_tree ,
OG_06_0001061 (SeedPlants) Phylogenetic Tree(s): OG_06_0001061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g081830.3.1
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012735001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.09 Archaeplastida
GSVIVT01037646001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.07 Archaeplastida
LOC_Os05g41910.1 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os08g09170.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429999g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429999g0020 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c19_17050V3.1 No alias No annotation 0.02 Archaeplastida
Solyc06g074190.3.1 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.05 Archaeplastida
Solyc07g064580.3.1 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g083190.3.1 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e039960_P001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!